Transcript: lnc-ACO1-11:2

Basic information

LNCipedia transcript ID: lnc-ACO1-11:2 
LNCipedia gene ID: lnc-ACO1-11
Location (hg38): chr9:31580025-31606153
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2142 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT130656; FPKM1_group_32931_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -126.407 non-coding 
CPAT coding probability 0.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACO1-11:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ACO1-3:2
4.0 lnc-ACO1-3:2
4.1 lnc-ACO1-3:2
5.0 lnc-ACO1-3:2
5.1 lnc-RECK-85:2
5.2 lnc-ACO1-11:2