Transcript: lnc-ACACB-1:3

Basic information

LNCipedia transcript ID: lnc-ACACB-1:3 
LNCipedia gene ID: lnc-ACACB-1
Location (hg38): chr12:109111218-109113378
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 539 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000541704.1; RP11-443D10.3-001; OTTHUMT00000403075.1; NONHSAT030594
Alternative gene names: ENSG00000256139.1; RP11-443D10.3; OTTHUMG00000169249.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -116.4383 non-coding 
CPAT coding probability 6.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACACB-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UNG-1:1
4.0 lnc-ACACB-1:3
4.1 lnc-ACACB-1:3
5.0 lnc-ACACB-1:3
5.1 lnc-TCHP-19:2
5.2 lnc-ACACB-1:3