Transcript: lnc-ABHD17C-1:1

Basic information

LNCipedia transcript ID: lnc-ABHD17C-1:1 
LNCipedia gene ID: lnc-ABHD17C-1
Location (hg38): chr15:80821903-80823665
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 736 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_1198_chr15:81114243-81115969_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -174.2768 non-coding 
CPAT coding probability 4.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABHD17C-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM108C1-1:1
4.0 lnc-FAM108C1-1:1
4.1 lnc-FAM108C1-1:1
5.0 lnc-FAM108C1-1:1
5.1 lnc-CFAP161-2:1
5.2 lnc-ABHD17C-1:1