Transcript: lnc-ABCG8-1:1

Basic information

LNCipedia transcript ID: lnc-ABCG8-1:1 
LNCipedia gene ID: lnc-ABCG8-1
Location (hg38): chr2:43995985-43996623
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 639 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT070404
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -108.0278 non-coding 
CPAT coding probability 3.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABCG8-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ABCG8-1:1
4.0 lnc-ABCG8-1:1
4.1 lnc-ABCG8-1:1
5.0 lnc-ABCG8-1:1
5.1 lnc-EPAS1-20:1
5.2 lnc-ABCG8-1:1