Transcript: lnc-ABCE1-3:2

Basic information

LNCipedia transcript ID: lnc-ABCE1-3:2 
LNCipedia gene ID: lnc-ABCE1-3
Location (hg38): chr4:145034341-145038294
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3954 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000222594.1|FTMT21600008623.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.9443 non-coding 
CPAT coding probability 3.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABCE1-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ABCE1-3:2
5.0 lnc-ABCE1-3:2
5.1 lnc-SMAD1-5:1
5.2 lnc-ABCE1-3:2