Transcript: lnc-ABCC2-3:1

Basic information

LNCipedia transcript ID: lnc-ABCC2-3:1 
LNCipedia gene ID: lnc-ABCC2-3
Location (hg38): chr10:100020372-100034773
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 203 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT015944; FPKM1_group_3814_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -22.7445 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABCC2-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ABCC2-3:1
4.0 lnc-ABCC2-3:1
4.1 lnc-ABCC2-3:1
5.0 lnc-ABCC2-3:1
5.1 lnc-SMC3-158:1
5.2 lnc-ABCC2-3:1