Transcript: lnc-ABCB9-1:1

Basic information

LNCipedia transcript ID: lnc-ABCB9-1:1 
LNCipedia gene ID: lnc-ABCB9-1
Location (hg38): chr12:122929001-122981649
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 6482 bp
Exons: 12
Sources: Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000540866
Alternative gene names: ENSG00000256028; RP11-197N18.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8355.4411 coding 
CPAT coding probability 100.00% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ABCB9-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ABCB9-1:1
3.1 lnc-ABCB9-1:1
4.0 lnc-ABCB9-1:1
4.1 lnc-ABCB9-1:1
5.0 lnc-ABCB9-1:1
5.1 lnc-SBNO1-14:1
5.2 lnc-ABCB9-1:1