Transcript: lnc-ABCA1-8:6

Basic information

LNCipedia transcript ID: lnc-ABCA1-8:6 
LNCipedia gene ID: lnc-ABCA1-8
Location (hg38): chr9:105239116-105244367
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 5252 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000109338.1|ENCT00000459255.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -24.5888 non-coding 
CPAT coding probability 0.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABCA1-8:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ABCA1-8:6
5.0 lnc-ABCA1-8:6
5.1 lnc-ERP44-54:7
5.2 lnc-ABCA1-8:6