Transcript: lnc-AAGAB-1:44

Basic information

LNCipedia transcript ID: lnc-AAGAB-1:44 
LNCipedia gene ID: lnc-AAGAB-1
Location (hg38): chr15:66984122-66987329
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 285 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023705; NONHSAT046823
Alternative gene names: XLOC_011510; linc-LCTL-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -47.2361 non-coding 
CPAT coding probability 1.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AAGAB-1:44 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-342M21.2.1-1:4
3.1 lnc-RP11-342M21.2.1-1:7
4.0 lnc-RP11-342M21.2.1-1:7
4.1 lnc-RP11-342M21.2.1-1:7
5.0 lnc-RP11-342M21.2.1-1:7
5.1 lnc-AAGAB-1:23
5.2 lnc-AAGAB-1:44