Transcript: lnc-AAGAB-1:35

Basic information

LNCipedia transcript ID: lnc-AAGAB-1:35 
LNCipedia gene ID: lnc-AAGAB-1
Location (hg38): chr15:67000777-67001181
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 405 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT046834
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 29.5802 non-coding 
CPAT coding probability 46.06% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-AAGAB-1:35 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-342M21.2.1-1:14
4.0 lnc-RP11-342M21.2.1-1:14
4.1 lnc-RP11-342M21.2.1-1:14
5.0 lnc-RP11-342M21.2.1-1:14
5.1 lnc-AAGAB-1:14
5.2 lnc-AAGAB-1:35