Transcript: lnc-AACS-3:1

Basic information

LNCipedia transcript ID: lnc-AACS-3:1 
LNCipedia gene ID: lnc-AACS-3
Location (hg38): chr12:125281164-125290139
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 434 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020616; NONHSAT031721
Alternative gene names: XLOC_009933; linc-TMEM132B-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -84.0621 non-coding 
CPAT coding probability 0.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AACS-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AACS-3:1
3.1 lnc-AACS-3:1
4.0 lnc-AACS-3:1
4.1 lnc-AACS-3:1
5.0 lnc-AACS-3:1
5.1 lnc-RFLNA-18:2
5.2 lnc-AACS-3:1