Transcript: ZRANB2-AS2:28

Basic information

LNCipedia transcript ID: ZRANB2-AS2:28 
HGNC Gene Symbol: ZRANB2-AS2    
HGNC Full Gene Name: ZRANB2 antisense RNA 2 (head to head)
Ensembl Gene ID: ENSG00000229956
Ensembl Transcript ID: ENST00000430605
Location (hg38): chr1:71401847-71407724
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 213 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000430605.1; NEGR1-AS1-001; OTTHUMT00000026853.2; NONHSAT003897
Alternative gene names: ENSG00000227126.1; NEGR1-AS1; OTTHUMG00000009733.2; ENSG00000229956.5; ZRANB2-AS2; ENSG00000229956.10;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -221.3552 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZRANB2-AS2:28 yes no no no

Available literature

  1. Wang (2014), [Effect of curcumin on radiosensitization of CNE-2 cells and its mechanism]., Zhongguo Zhong Yao Za Zhi


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CTH-6:5
4.0 ZRANB2-AS2:28
4.1 ZRANB2-AS2:28
5.0 ZRANB2-AS2:28
5.1 ZRANB2-AS2:28
5.2 ZRANB2-AS2:28