Transcript: ZRANB2-AS2:1

Basic information

LNCipedia transcript ID: ZRANB2-AS2:1 
HGNC Gene Symbol: ZRANB2-AS2    
HGNC Full Gene Name: ZRANB2 antisense RNA 2 (head to head)
Ensembl Gene ID: ENSG00000229956
Ensembl Transcript ID: ENST00000455406
RefSeq ID: NR_046217
Location (hg38): chr1:71081324-71237723
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 783 bp
Exons: 4
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000455406; ENST00000455406.1; ZRANB2-AS2-002; OTTHUMT00000026644.1; NONHSAT003885; NR_046217; ENST00000455406.5; NR_046217.1
Alternative gene names: ENSG00000229956; RP11-386O9.1; ENSG00000229956.2; ZRANB2-AS2; OTTHUMG00000009662.2; ENSG00000229956.5; ENSG00000229956.10;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -107.4614 non-coding 
CPAT coding probability 1.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZRANB2-AS2:1 no no no no

Available literature

  1. Wang (2014), [Effect of curcumin on radiosensitization of CNE-2 cells and its mechanism]., Zhongguo Zhong Yao Za Zhi


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CTH-4:1
3.1 lnc-CTH-6:2
4.0 ZRANB2-AS2:1
4.1 ZRANB2-AS2:1
5.0 ZRANB2-AS2:1
5.1 ZRANB2-AS2:1
5.2 ZRANB2-AS2:1