Transcript: ZEB1-AS1:15

Basic information

LNCipedia transcript ID: ZEB1-AS1:15 
LNCipedia gene ID: ZEB1-AS1
Location (hg38): chr10:31316529-31318436
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1825 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT012612
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -137.8867 non-coding 
CPAT coding probability 0.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZEB1-AS1:15 no no no no

Available literature

  1. Liu (2017), Interplay Between Long Noncoding RNA ZEB1-AS1 and miR-200s Regulates Osteosarcoma Cell Proliferation and Migration., J. Cell. Biochem.
  2. Li (2016), Upregulation of long noncoding RNA ZEB1-AS1 promotes tumor metastasis and predicts poor prognosis in hepatocellular carcinoma., Oncogene
  3. Liu (2016), Long noncoding RNA ZEB1-AS1 acts as an oncogene in osteosarcoma by epigenetically activating ZEB1., Am J Transl Res
  4. Wang (2015), Expression of long non-coding RNA ZEB1-AS1 in esophageal squamous cell carcinoma and its correlation with tumor progression and patient survival., Int J Clin Exp Pathol
  5. Fang (2014), A distinct set of long non-coding RNAs in childhood MLL-rearranged acute lymphoblastic leukemia: biology and epigenetic target., Hum. Mol. Genet.
  6. Zhu (2014), The long noncoding RNA expression profile of hepatocellular carcinoma identified by microarray analysis., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL117340.1-2:14
4.0 ZEB1-AS1:15
4.1 ZEB1-AS1:15
5.0 ZEB1-AS1:15
5.1 ZEB1-AS1:15
5.2 ZEB1-AS1:15