Transcript: ZBTB20-AS3:1

Basic information

LNCipedia transcript ID: ZBTB20-AS3:1 
LNCipedia gene ID: ZBTB20-AS3
RefSeq ID: NR_126422
Location (hg38): chr3:114873033-114876514
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 545 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126422; NR_126422.1
Alternative gene names: ; ZBTB20-AS3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -86.8216 non-coding 
CPAT coding probability 1.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZBTB20-AS3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TIGIT-5:2
4.0 ZBTB20-AS3:1
4.1 ZBTB20-AS3:1
5.0 ZBTB20-AS3:1
5.1 ZBTB20-AS3:1
5.2 ZBTB20-AS3:1