Transcript: WDR86-AS1:18

Basic information

LNCipedia transcript ID: WDR86-AS1:18 
LNCipedia gene ID: WDR86-AS1
RefSeq ID: NR_034012
Location (hg38): chr7:151409161-151413048
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 864 bp
Exons: 5
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_034012.2
Alternative gene names: WDR86-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -58.583 non-coding 
CPAT coding probability 53.68% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
WDR86-AS1:18 no no no no

Available literature

  1. Hou (2014), Long noncoding RNAs expression patterns associated with chemo response to cisplatin based chemotherapy in lung squamous cell carcinoma patients., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 WDR86-AS1:18
5.1 WDR86-AS1:18
5.2 WDR86-AS1:18