Transcript: VWA8-AS1:1

Basic information

LNCipedia transcript ID: VWA8-AS1:1 
LNCipedia gene ID: VWA8-AS1
Ensembl Gene ID: ENSG00000278338
Ensembl Transcript ID: ENST00000612345
Location (hg38): chr13:41955808-41980977
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 474 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000612345.4
Alternative gene names: ENSG00000278338.4; VWA8-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -75.7605 non-coding 
CPAT coding probability 1.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
VWA8-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 VWA8-AS1:1
4.1 VWA8-AS1:1
5.0 VWA8-AS1:1
5.1 VWA8-AS1:1
5.2 VWA8-AS1:1