Transcript: UST-AS1:3

Basic information

LNCipedia transcript ID: UST-AS1:3 
LNCipedia gene ID: UST-AS1
RefSeq ID: NR_038408
Location (hg38): chr6:148954259-148964684
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2083 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_038408.1
Alternative gene names: UST-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -36.6384 non-coding 
CPAT coding probability 3.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
UST-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 UST-AS1:3
5.1 UST-AS1:3
5.2 UST-AS1:3