Transcript: UST-AS1:2

Basic information

LNCipedia transcript ID: UST-AS1:2 
LNCipedia gene ID: UST-AS1
Location (hg38): chr6:148954261-148964684
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2081 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT115482; NR_038408
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -36.6384 non-coding 
CPAT coding probability 6.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
UST-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZC3H12D-3:2
4.0 UST-AS1:2
4.1 UST-AS1:2
5.0 UST-AS1:2
5.1 UST-AS1:2
5.2 UST-AS1:2