Transcript: USP46-AS1:1

Basic information

LNCipedia transcript ID: USP46-AS1:1 
LNCipedia gene ID: USP46-AS1
Location (hg38): chr4:52656664-52661158
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 368 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT096365
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -194.9775 non-coding 
CPAT coding probability 1.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
USP46-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RASL11B-5:2
4.0 USP46-AS1:1
4.1 USP46-AS1:1
5.0 USP46-AS1:1
5.1 USP46-AS1:1
5.2 USP46-AS1:1