Transcript: TTTY4:1

Basic information

LNCipedia transcript ID: TTTY4:1 
LNCipedia gene ID: TTTY4
Location (hg38): chrY:22936455-22973283
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1345 bp
Exons: 4
Sources: Broad Institute
Alternative transcript names: TCONS_00017580
Alternative gene names: XLOC_008301; linc-BPY2-2; TTY4; TTTY4A; LINC00123


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 22.8624 non-coding 
CPAT coding probability 0.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TTTY4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BPY2-1:1
3.1 lnc-BPY2-1:2
4.0 TTTY4:1
4.1 TTTY4:1
5.0 TTTY4:1
5.1 TTTY4:1
5.2 TTTY4:1