Transcript: TTTY12:2

Basic information

LNCipedia transcript ID: TTTY12:2 
HGNC Gene Symbol: TTTY12    
HGNC Full Gene Name: testis-specific transcript, Y-linked 12
Ensembl Gene ID: ENSG00000237048
Ensembl Transcript ID: ENST00000413466
RefSeq ID: NR_001551
Location (hg38): chrY:7804924-7810683
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 979 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000413466; ENST00000413466.2; TTTY12-001; OTTHUMT00000144994.1; NONHSAT139370; NR_001551.1
Alternative gene names: ENSG00000237048; TTTY12; ENSG00000237048.2; OTTHUMG00000067560.1; TTY11; NCRNA00135


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.8756 non-coding 
CPAT coding probability 0.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TTTY12:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TBL1Y-2:2
3.1 lnc-TBL1Y-2:2
4.0 TTTY12:2
4.1 TTTY12:2
5.0 TTTY12:2
5.1 TTTY12:2
5.2 TTTY12:2