Transcript: TTTY11:1

Basic information

LNCipedia transcript ID: TTTY11:1 
HGNC Gene Symbol: TTTY11    
HGNC Full Gene Name: testis-specific transcript, Y-linked 11
Ensembl Gene ID: ENSG00000180910
Ensembl Transcript ID: ENST00000253470
Location (hg38): chrY:8783310-8817382
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 837 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000253470; ENST00000253470.4; TTTY11-001; OTTHUMT00000098854.2; NONHSAT139397
Alternative gene names: ENSG00000180910; TTTY11; ENSG00000180910.7; OTTHUMG00000041259.2; TTY11; NCRNA00134


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.7627 non-coding 
CPAT coding probability 35.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TTTY11:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC006156.2-1:1
3.1 lnc-AC006156.2-5:1
4.0 TTTY11:1
4.1 TTTY11:1
5.0 TTTY11:1
5.1 TTTY11:1
5.2 TTTY11:1