Transcript: TMEM72-AS1:18

Basic information

LNCipedia transcript ID: TMEM72-AS1:18 
LNCipedia gene ID: TMEM72-AS1
Location (hg38): chr10:44899614-44920220
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1444 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000436877.1; RP11-285G1.2-001; OTTHUMT00000047762.1
Alternative gene names: ENSG00000234504.1; RP11-285G1.2; OTTHUMG00000018065.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -57.8343 non-coding 
CPAT coding probability 33.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMEM72-AS1:18 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf10-1:1
4.0 lnc-C10orf10-1:1
4.1 TMEM72-AS1:18
5.0 TMEM72-AS1:18
5.1 TMEM72-AS1:18
5.2 TMEM72-AS1:18