Transcript: TMEM51-AS1:2

Basic information

LNCipedia transcript ID: TMEM51-AS1:2 
LNCipedia gene ID: TMEM51-AS1
RefSeq ID: NR_027136
Location (hg38): chr1:15111815-15152464
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6979 bp
Exons: 5
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT001017; NR_027136; NR_027136.1
Alternative gene names: FLJ23703; TMEM51-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -53.942 non-coding 
CPAT coding probability 71.94% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
TMEM51-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf195-1:3
4.0 TMEM51-AS1:2
4.1 TMEM51-AS1:2
5.0 TMEM51-AS1:2
5.1 TMEM51-AS1:2
5.2 TMEM51-AS1:2