Transcript: TMEM254-AS1:7

Basic information

LNCipedia transcript ID: TMEM254-AS1:7 
LNCipedia gene ID: TMEM254-AS1
Location (hg38): chr10:80046860-80078912
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3051 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000432070; ENST00000432070.1; RP11-369J21.5-002; OTTHUMT00000049028.1
Alternative gene names: ENSG00000230091; RP11-369J21.5; ENSG00000230091.1; OTTHUMG00000018601.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.1968 non-coding 
CPAT coding probability 26.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMEM254-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SFTPD-1:1
3.1 lnc-SFTPD-1:1
4.0 TMEM254-AS1:7
4.1 TMEM254-AS1:7
5.0 TMEM254-AS1:7
5.1 TMEM254-AS1:7
5.2 TMEM254-AS1:7