Transcript: TMEM254-AS1:13

Basic information

LNCipedia transcript ID: TMEM254-AS1:13 
LNCipedia gene ID: TMEM254-AS1
Location (hg38): chr10:80036218-80051057
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4931 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_338_chr10:81795973-81807041_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 19.7006 non-coding 
CPAT coding probability 7.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMEM254-AS1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SFTPD-1:12
4.0 TMEM254-AS1:13
4.1 TMEM254-AS1:13
5.0 TMEM254-AS1:13
5.1 TMEM254-AS1:13
5.2 TMEM254-AS1:13