Transcript: TMCC1-AS1:9

Basic information

LNCipedia transcript ID: TMCC1-AS1:9 
LNCipedia gene ID: TMCC1-AS1
Location (hg38): chr3:129893865-129905861
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1058 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000271270.1|ENST00000605698.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.838 non-coding 
CPAT coding probability 2.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMCC1-AS1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TMCC1-AS1:9
5.0 TMCC1-AS1:9
5.1 TMCC1-AS1:9
5.2 TMCC1-AS1:9