Transcript: TLX1NB:4

Basic information

LNCipedia transcript ID: TLX1NB:4 
LNCipedia gene ID: TLX1NB
Location (hg38): chr10:101089363-101089756
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 394 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT016011
Alternative gene names: TD1; TDI; APT-B7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TLX1NB:4 no no no no

Available literature

  1. Greene (2007), A promoter with bidirectional activity is located between TLX1/HOX11 and a divergently transcribed novel human gene., Gene


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PDZD7-4:4
4.0 TLX1NB:4
4.1 TLX1NB:4
5.0 TLX1NB:4
5.1 TLX1NB:4
5.2 TLX1NB:4