Transcript: THSD4-AS1:3

Basic information

LNCipedia transcript ID: THSD4-AS1:3 
LNCipedia gene ID: THSD4-AS1
RefSeq ID: NR_120348
Location (hg38): chr15:71166812-71189059
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 815 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120348; NR_120348.1
Alternative gene names: ; THSD4-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -29.8212 non-coding 
CPAT coding probability 0.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
THSD4-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CT62-1:11
4.0 THSD4-AS1:3
4.1 THSD4-AS1:3
5.0 THSD4-AS1:3
5.1 THSD4-AS1:3
5.2 THSD4-AS1:3