Transcript: THRIL:1

Basic information

LNCipedia transcript ID: THRIL:1 
LNCipedia gene ID: THRIL
Location (hg38): chr12:125025932-125029351
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2893 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Broad Institute; NONCODE v4
Alternative transcript names: ENST00000501992; TCONS_00020260; NONHSAT031707
Alternative gene names: ENSG00000245605; XLOC_010236; linc-DHX37-22; Linc1992; TCONS_00020260; BRI3BP-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -25.0581 non-coding 
CPAT coding probability 1.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
THRIL:1 no no no no

Available literature

  1. Wu (2015), Association of large intergenic noncoding RNA expression with disease activity and organ damage in systemic lupus erythematosus., Arthritis Res. Ther.
  2. Li (2014), The long noncoding RNA THRIL regulates TNFα expression through its interaction with hnRNPL., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DHX37-1:1
3.1 lnc-DHX37-1:1
4.0 THRIL:1
4.1 THRIL:1
5.0 THRIL:1
5.1 THRIL:1
5.2 THRIL:1