Transcript: TGFA-IT1:1

Basic information

LNCipedia transcript ID: TGFA-IT1:1 
LNCipedia gene ID: TGFA-IT1
RefSeq ID: NR_046798
Location (hg38): chr2:70467385-70481640
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 492 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_046798; NR_046798.1
Alternative gene names: ; TGFA-IT1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -118.5959 non-coding 
CPAT coding probability 0.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TGFA-IT1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ADD2-1:2
4.0 TGFA-IT1:1
4.1 TGFA-IT1:1
5.0 TGFA-IT1:1
5.1 TGFA-IT1:1
5.2 TGFA-IT1:1