Transcript: TET2-AS1:1

Basic information

LNCipedia transcript ID: TET2-AS1:1 
LNCipedia gene ID: TET2-AS1
RefSeq ID: NR_126420
Location (hg38): chr4:105171354-105352881
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 754 bp
Exons: 6
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126420; NR_126420.1
Alternative gene names: ; TET2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 14.687 non-coding 
CPAT coding probability 7.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TET2-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPA2-3:2
4.0 TET2-AS1:1
4.1 TET2-AS1:1
5.0 TET2-AS1:1
5.1 TET2-AS1:1
5.2 TET2-AS1:1