Transcript: TESC-AS1:4

Basic information

LNCipedia transcript ID: TESC-AS1:4 
HGNC Gene Symbol: TESC-AS1    
HGNC Full Gene Name: TESC antisense RNA 1 (head to head)
Ensembl Gene ID: ENSG00000258285
Ensembl Transcript ID: ENST00000547006
Location (hg38): chr12:117099481-117142091
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1053 bp
Exons: 3
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000547006; ENST00000547006.1; RP11-103B5.2-001; OTTHUMT00000404406.1
Alternative gene names: ENSG00000258285; RP11-103B5.2; ENSG00000258285.1; OTTHUMG00000169494.1; TESC-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -137.6852 non-coding 
CPAT coding probability 2.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TESC-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FBXW8-1:1
3.1 lnc-FBXW8-1:1
4.0 TESC-AS1:4
4.1 TESC-AS1:4
5.0 TESC-AS1:4
5.1 TESC-AS1:4
5.2 TESC-AS1:4