Transcript: SSTR5-AS1:8

Basic information

LNCipedia transcript ID: SSTR5-AS1:8 
LNCipedia gene ID: SSTR5-AS1
Location (hg38): chr16:1066494-1078621
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 393 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000261713.2|ENST00000566499.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -63.5519 non-coding 
CPAT coding probability 16.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SSTR5-AS1:8 no no no no

Available literature

  1. Ramnarine (2018), The long noncoding RNA landscape of neuroendocrine prostate cancer and its clinical implications., Gigascience


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 SSTR5-AS1:8
5.0 SSTR5-AS1:8
5.1 SSTR5-AS1:8
5.2 SSTR5-AS1:8