Transcript: SRRM2-AS1:4

Basic information

LNCipedia transcript ID: SRRM2-AS1:4 
LNCipedia gene ID: SRRM2-AS1
RefSeq ID: NR_027275
Location (hg38): chr16:2737076-2752600
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 845 bp
Exons: 6
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_027275; NR_027275.1
Alternative gene names: ; SRRM2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.9914 non-coding 
CPAT coding probability 1.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SRRM2-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC092117.1-1:8
4.0 SRRM2-AS1:4
4.1 SRRM2-AS1:4
5.0 SRRM2-AS1:4
5.1 SRRM2-AS1:4
5.2 SRRM2-AS1:4