Transcript: SRP14-AS1:9

Basic information

LNCipedia transcript ID: SRP14-AS1:9 
LNCipedia gene ID: SRP14-AS1
RefSeq ID: NR_040060
Location (hg38): chr15:40039311-40067509
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2536 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT041796; NR_040060; NR_040060.1
Alternative gene names: ; SRP14-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.0852 non-coding 
CPAT coding probability 5.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SRP14-AS1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EIF2AK4-2:15
4.0 SRP14-AS1:9
4.1 SRP14-AS1:9
5.0 SRP14-AS1:9
5.1 SRP14-AS1:9
5.2 SRP14-AS1:9