Transcript: SRGAP3-AS4:1

Basic information

LNCipedia transcript ID: SRGAP3-AS4:1 
LNCipedia gene ID: SRGAP3-AS4
Location (hg38): chr3:9249593-9252280
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 502 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT087752
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.0322 non-coding 
CPAT coding probability 3.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SRGAP3-AS4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-THUMPD3-1:5
4.0 SRGAP3-AS4:1
4.1 SRGAP3-AS4:1
5.0 SRGAP3-AS4:1
5.1 SRGAP3-AS4:1
5.2 SRGAP3-AS4:1