Transcript: SPAG5-AS1:14

Basic information

LNCipedia transcript ID: SPAG5-AS1:14 
LNCipedia gene ID: SPAG5-AS1
Location (hg38): chr17:28599757-28607848
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1636 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227543.3|ENCT00000173438.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.0891 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SPAG5-AS1:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 SPAG5-AS1:14
5.0 SPAG5-AS1:14
5.1 SPAG5-AS1:14
5.2 SPAG5-AS1:14