Transcript: SORCS3-AS1:3

Basic information

LNCipedia transcript ID: SORCS3-AS1:3 
LNCipedia gene ID: SORCS3-AS1
RefSeq ID: NR_104028
Location (hg38): chr10:104664608-104666216
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1294 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_104028; NR_104028.1
Alternative gene names: ; SORCS3-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -148.7882 non-coding 
CPAT coding probability 1.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SORCS3-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ITPRIP-3:2
4.0 SORCS3-AS1:3
4.1 SORCS3-AS1:3
5.0 SORCS3-AS1:3
5.1 SORCS3-AS1:3
5.2 SORCS3-AS1:3