Transcript: SNHG21:19

Basic information

LNCipedia transcript ID: SNHG21:19 
LNCipedia gene ID: SNHG21
Location (hg38): chr15:82747229-82749304
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2076 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT047858; FPKM1_group_10665_transcript_2
Alternative gene names: SCARNA15HG; FSD2-AS1; RP11-752G15.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 21.7283 non-coding 
CPAT coding probability 4.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SNHG21:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WHAMM-3:2
4.0 lnc-WHAMM-3:2
4.1 SNHG21:19
5.0 SNHG21:19
5.1 SNHG21:19
5.2 SNHG21:19