Transcript: SNHG10:11

Basic information

LNCipedia transcript ID: SNHG10:11 
LNCipedia gene ID: SNHG10
Location (hg38): chr14:95533355-95533629
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 275 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT039457; NR_003002
Alternative gene names: FLJ40557; NCRNA00063; LINC00063


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -85.8819 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SNHG10:11 yes no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C14orf49-4:10
4.0 SNHG10:11
4.1 SNHG10:11
5.0 SNHG10:11
5.1 SNHG10:11
5.2 SNHG10:11