Transcript: SMIM10L2B-AS1:8

Basic information

LNCipedia transcript ID: SMIM10L2B-AS1:8 
LNCipedia gene ID: SMIM10L2B-AS1
RefSeq ID: NR_103770
Location (hg38): chrX:135120621-135123601
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 413 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT147751; NR_103770; NR_103770.1
Alternative gene names: LOC100287728


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -428.0669 non-coding 
CPAT coding probability 15.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SMIM10L2B-AS1:8 no no no no

Available literature

  1. Long (2016), Distinct expression profiles of lncRNAs between early-onset preeclampsia and preterm controls., Clin. Chim. Acta


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM127A-2:3
4.0 lnc-FAM127A-2:3
4.1 lnc-FAM127A-2:3
5.0 lnc-FAM127A-2:3
5.1 SMIM10L2B-AS1:4
5.2 SMIM10L2B-AS1:8