Transcript: SMILR:2

Basic information

LNCipedia transcript ID: SMILR:2 
LNCipedia gene ID: SMILR
RefSeq ID: NR_131202
Location (hg38): chr8:122414327-122568644
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 569 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_131202.1
Alternative gene names: LOC105375734


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -189.2103 non-coding 
CPAT coding probability 0.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SMILR:2 no no no no

Available literature

  1. Ballantyne (2016), Smooth Muscle Enriched Long Noncoding RNA (SMILR) Regulates Cell Proliferation., Circulation


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 SMILR:2
5.1 SMILR:2
5.2 SMILR:2