Transcript: SMAD1-AS2:3

Basic information

LNCipedia transcript ID: SMAD1-AS2:3 
LNCipedia gene ID: SMAD1-AS2
Location (hg38): chr4:145497065-145502965
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1092 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT098630
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -146.9129 non-coding 
CPAT coding probability 3.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SMAD1-AS2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF827-6:3
4.0 SMAD1-AS2:3
4.1 SMAD1-AS2:3
5.0 SMAD1-AS2:3
5.1 SMAD1-AS2:3
5.2 SMAD1-AS2:3