Transcript: SLIT1-AS1:1

Basic information

LNCipedia transcript ID: SLIT1-AS1:1 
LNCipedia gene ID: SLIT1-AS1
Location (hg38): chr10:97102755-97103920
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 863 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT015847
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -195.2821 non-coding 
CPAT coding probability 27.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SLIT1-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf12-2:2
4.0 SLIT1-AS1:1
4.1 SLIT1-AS1:1
5.0 SLIT1-AS1:1
5.1 SLIT1-AS1:1
5.2 SLIT1-AS1:1