Transcript: SLC25A25-AS1:19

Basic information

LNCipedia transcript ID: SLC25A25-AS1:19 
LNCipedia gene ID: SLC25A25-AS1
Location (hg38): chr9:128125244-128128114
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 258 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT134904
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 92.28% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
SLC25A25-AS1:19 yes no no no

Available literature

  1. Li (2016), Decreased expression of LncRNA SLC25A25-AS1 promotes proliferation, chemoresistance, and EMT in colorectal cancer cells., Tumour Biol.
  2. Xu (2014), [Expression of long non-coding RNA associated with radiotherapy-resistance in colorectal cancer cell lines with different radiosensitivity]., Zhonghua Wei Chang Wai Ke Za Zhi


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CIZ1-1:1
4.0 lnc-CIZ1-1:1
4.1 SLC25A25-AS1:19
5.0 SLC25A25-AS1:19
5.1 SLC25A25-AS1:19
5.2 SLC25A25-AS1:19