Transcript: SLC16A12-AS1:6

Basic information

LNCipedia transcript ID: SLC16A12-AS1:6 
HGNC Gene Symbol: SLC16A12-AS1    
HGNC Full Gene Name: SLC16A12 antisense RNA 1
Ensembl Gene ID: ENSG00000234452
Ensembl Transcript ID: ENST00000423474
Location (hg38): chr10:89462615-89468140
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 405 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000423474.1; RP11-168O10.6-002; OTTHUMT00000049307.1; NONHSAT015515
Alternative gene names: ENSG00000234452.1; RP11-168O10.6; OTTHUMG00000018715.1; ENSG00000234452.5; SLC16A12-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -308.2768 non-coding 
CPAT coding probability 0.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SLC16A12-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IFIT5-1:2
4.0 SLC16A12-AS1:6
4.1 SLC16A12-AS1:6
5.0 SLC16A12-AS1:6
5.1 SLC16A12-AS1:6
5.2 SLC16A12-AS1:6