Transcript: SLC14A2-AS1:6

Basic information

LNCipedia transcript ID: SLC14A2-AS1:6 
HGNC Gene Symbol: SLC14A2-AS1    
HGNC Full Gene Name: SLC14A2 antisense RNA 1
Ensembl Gene ID: ENSG00000267097
Ensembl Transcript ID: ENST00000592899
Location (hg38): chr18:45438174-45447346
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 359 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT059103; ENST00000592899.1
Alternative gene names: ENSG00000267097.1; RP11-309E23.2; SLC14A2-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -167.8913 non-coding 
CPAT coding probability 1.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SLC14A2-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EPG5-7:5
4.0 SLC14A2-AS1:6
4.1 SLC14A2-AS1:6
5.0 SLC14A2-AS1:6
5.1 SLC14A2-AS1:6
5.2 SLC14A2-AS1:6