Transcript: SCEL-AS1:4

Basic information

LNCipedia transcript ID: SCEL-AS1:4 
LNCipedia gene ID: SCEL-AS1
Location (hg38): chr13:77599756-77606551
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 449 bp
Exons: 3
Sources: Refseq - Dec 2014
Alternative transcript names: NR_126413
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -319.4541 non-coding 
CPAT coding probability 1.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SCEL-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MYCBP2-1:6
4.0 SCEL-AS1:4
4.1 SCEL-AS1:4
5.0 SCEL-AS1:4
5.1 SCEL-AS1:4
5.2 SCEL-AS1:4